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CATH is a tree-like, hierarchical classification that starts off at the tree “trunk” by clustering protein domains into broad categories (e.g. C, or class, where domains are clustered solely based on …
At the heart of the system is the CATH classification of protein domains, derived from integrated semi-automatic processing and manual-curation of high-resolution 3D structures in the wwPDB. …
Search CATH by protein sequence (FASTA) Locate the position of structural domains on your protein sequence.
26 thg 11, 2024 · Experimentally-determined protein three-dimensional structures are obtained from the Protein Data Bank and split into their consecutive polypeptide chains, where applicable. …
Directory Structure releases/ This directory contains all of the CATH-Gene3D database releases, from the first to the latest. All previous releases are in releases/previous-releases/ and the latest …
This page provides information on the data files that are available to download from the CATH FTP site. See CATH Releases for more information on CATH and CATH-Plus.
CATH: Protein Structure Classification Database by I. Sillitoe, N. Dawson, T. Lewis, D. Lee, J. Lees, C. Orengo is licensed under a Creative Commons Attribution 4.0 ...
CATH-Gene3D provides information on the evolutionary relationships of protein domains through sequence, structure and functional annotation data. The homologous superfamily (H) level of the …
22 thg 3, 2010 · If a given domain has sufficiently high sequence and structural similarity (ie. 35% sequence identity, SSAP score >= 80) with a domain that has been previously classified in CATH, …
19 thg 6, 2019 · Introduction In this practical, you will be introduced to the CATH/Gene3D websites and web servers that will help you carry out an investigation into protein structure and function.
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